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1D Convolutional Neural Network for Estimating BOLD Signal from Oscillating Steady State Signal
Mariama Salifu1, Melissa Haskell2, and Douglas C Noll1
1Biomedical Engineering, University of Michigan, Ann Arbor, MI, United States, 2Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI, United States
we proposed using a 1D convolutional neural network(1D CNN) for oscillating steady state imaging (OSSI) signal combination of fMRI data to solve the frequency sensitivity issues associated with L2-norm combined OSSI signals by directly estimating the BOLD signal from the OSSI signal.
Fig. 5. Human Subject: A-B, Activation maps computed from Pearson correlation coefficient with a threshold of 0.45. C-D, Compare time courses for two activation pixels in the visual cortex
Fig. 2. 1DCNN architecture, The input of the network is a 15s long 1D OSSI signal and its output is the corresponding 1D BOLD signal. 95% of the simulated BOLD and OSSI time courses were used for training while the remaining 5% were set aside for testing. L1 loss, ADAM optimizer with a learning rate of 0.007 was used for training the network.